From p.gleeson at ucl.ac.uk Fri Jun 6 11:32:26 2008 From: p.gleeson at ucl.ac.uk (Padraig Gleeson) Date: Fri, 06 Jun 2008 11:32:26 +0100 Subject: [neuroConstruct] New neuroConstruct version & tutorial at CNS Message-ID: <4849123A.9000603@ucl.ac.uk> Hi, A new version of neuroConstruct (v1.1.0) is available at http://www.neuroConstruct.org. This version features further support for NeuroML, better handling of mod file generation, more functions for manually editing cell morphologies, and a number of other updates and bug fixes. See http://www.physiol.ucl.ac.uk/research/silver_a/nCinfo/RELEASE_NOTES for full details. Note also there is a half day neuroConstruct tutorial this year at CNS in Portland (July 24th, the website, http://www.cnsorg.org/cns_meeting_workshops.htm, needs to be updated with the details). This will give an overview of the software, go through some use cases, and introduce the latest features currently in development including Python scripting for generating multiple simulations, the latest efforts on parallelisation, and some of the models which are currently being converted to NeuroML/neuroConstruct format. Please let me know if you wish to attend so an appropriate room can be reserved. There is also a workshop on interoperability the previous day (which is on the CNS website, but the agenda needs updating) which will present ideas from developers of computational and experimental neuroscience applications on how best to get their applications interacting. This will be wider in scope than NeuroML, encompassing a number of initiatives to facilitate the cycle between experimental data and modelling and analysis. There will be an open discussion to identify "gaps" in this toolchain, and to discuss future standardisation work to allow models of more biological detail to be developed in a portable and transparent way (e.g. incorporating SBML based signalling pathways). Regards, Padraig